1993-11-13 - Re: Bandwidth limitations, DNA binary coding

Header Data

From: “Perry E. Metzger” <pmetzger@lehman.com>
To: cypherpunks@toad.com
Message Hash: cb79125fd3e1003e76ac7198a1f6079191cf34deaba0b2695be3d65cd96170ff
Message ID: <9311130249.AA04254@snark.lehman.com>
Reply To: <01H58QZWMFG2002CL4@UNCVX1.OIT.UNC.EDU>
UTC Datetime: 1993-11-13 02:49:56 UTC
Raw Date: Fri, 12 Nov 93 18:49:56 PST

Raw message

From: "Perry E. Metzger" <pmetzger@lehman.com>
Date: Fri, 12 Nov 93 18:49:56 PST
To: cypherpunks@toad.com
Subject: Re: Bandwidth limitations, DNA binary coding
In-Reply-To: <01H58QZWMFG2002CL4@UNCVX1.OIT.UNC.EDU>
Message-ID: <9311130249.AA04254@snark.lehman.com>
MIME-Version: 1.0
Content-Type: text/plain



VACCINIA@uncvx1.oit.unc.edu says:
>         There are four base pair combinations, but HUGO (Human Genome 
> Organization) has elected to use 15 letter symbols in it's representation
> of the genome coding sequence (X is any base, for instance). 15 symbols, 
> 1 byte.

15 symbols, HALF a byte (actually a touch less.) One nybble can
express 16 possible symbols (or one Hex digit, or whatever.) 

Plus, of course, the genome is highly compressable -- lots of repeated
sequences, especially in interons.

Perry





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